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Table 1 Properties of considered datasets

From: A Novel Biclustering Algorithm for the Discovery of Meaningful Biological Correlations between microRNAs and their Target Genes

Dataset

Data Source

No. interactions

No. miRNA

No. mRNA

GO Filter

Weighting

miRTarBase

miRTarBase

2,881

301

1,730

 

Binary

miRTarBase filt

miRTarBase

2,336

287

1,291

•

Binary

mirDIP

mirDIP

307,075

703

13,714

 

Average

FmirDIP

mirDIP

307,075

703

13,714

 

F-Score

mirDIP filt

mirDIP

207,011

703

8,495

•

Average

FmirDIP filt

mirDIP

207,011

703

8,495

•

F-Score

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BMC Bioinformatics

ISSN: 1471-2105

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