Table 4 Pathways commonly detected by SAM, eBayes, DESeq and baySeq
Up-regulated | |
|---|---|
Atherosclerosis Signaling | Human Embryonic Stem Cell Pluripotency |
Interferon Signaling | Bladder Cancer Signaling |
LPS/IL-1 Mediated Inhibition of RXR Function | Activation of IRF by Cytosolic Pattern Recognition Receptors |
Antigen Presentation Pathway | Factors Promoting Cardiogenesis in Vertebrates |
Role of BRCA1 in DNA Damage Response | Role of CHK Proteins in Cell Cycle Checkpoint Control |
Hepatic Fibrosis/Hepatic Stellate Cell Activation | FXR/RXR Activation |
Type I Diabetes Mellitus Signaling | Glutathione-mediated Detoxification |
Estrogen-mediated S-phase Entry | Hereditary Breast Cancer Signaling |
GADD45 Signaling | Neuroprotective Role of THOP1 in Alzheimer's Disease |
Caveolar-mediated Endocytosis Signaling | JAK/Stat Signaling |
Graft-versus-Host Disease Signaling | Protein Ubiquitination Pathway |
LXR/RXR Activation | PI3K/AKT Signaling |
Oncostatin M Signaling | CDK5 Signaling |
Autoimmune Thyroid Disease Signaling | Role of IL-17A in Arthritis |
Cell Cycle Regulation by BTG Family Proteins | Aryl Hydrocarbon Receptor Signaling |
ATM Signaling | Role of Osteoblasts, Osteoclasts and Chondrocytes in Rheumatoid Arthritis |
Down-regulated | |
FXR/RXR Activation | Â |