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Table 2 Statistical significance of the comparison of AmpMCF and EM

From: Reconstruction of viral population structure from next-generation sequencing data using multicommodity flows

 

Geometric distribution

# of reads

5000

20000

100000

p-value RMSE

0.001100

0.000069

0.000070

p-value JSD

0.200130

0.742240

0.000718

p-value S

0.46294

0.11743

0.84517

p-value PPV

0.66827

0.79078

0.037853

 

Uniform distribution

# of reads

5000

20000

100000

p-value RMSE

0.122800

0.061063

0.015030

p-value JSD

0.339790

0.818120

0.742170

p-value S

0.34978

0.78918

0.89135

p-value PPV

0.13832

0.89501

0.50755

 

Skewed distribution

# of reads

5000

20000

100000

p-value RMSE

0.469220

0.717980

0.224440

p-value JSD

0.211260

0.004284

0.023486

p-value S

-

0.12341

0.39881

p-value PPV

0.20846

0.53018

0.40896