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Table 1 Summary of crystal parameters, data collection, and refinement statistics for Acel_2062 from acidothermus cellulolyticus 11b [PDB:3e11]

From: New mini- zincin structures provide a minimal scaffold for members of this metallopeptidase superfamily

Data collection

λ 1MADSe

λ 2MADSe

λ 3MADSe

Wavelength (Å)

0.97949

0.91837

0.97897

Resolution range (Å)

29.437-1.800

29.412-1.801

29.399-1.803

No. of observations

49,068

49,153

48,819

No. of unique reflections

19,523

19,533

19,440

Completeness (%)

95.3 (94.6)a

95.5 (93.5)a

94.9 (90.2)a

Mean I/σ(I)

8.50 (1.69)a

8.31 (1.67)a

8.08 (1.51)a

R sym on I (%)

6.3 (48.0)a

6.4 (45.7)a

6.8 (55.5)a

R meas on I (%)

9.1 (63.8)a

9.6 (64.7)a

10.5 (74.3)a

Highest resolution shell (Å)

1.86-1.80

1.86-1.80

1.86-1.80

Model and refinement statistics

Resolution range (Å)

29.44-1.80

No. of reflections (total)

19,518

No. of reflections (test)

1,004

Completeness (%total)

99.0

Data set used in refinement

λ 1 MADSe

Cutoff criteria

|F| > 0

R cryst

0.175

R free §

0.204

Stereochemical parameters

Restraints (RMSD observed)

 

Bond angle (°)

1.386

Bond length (Å)

0.014

Average isotropic B-value (Å2)

11.273

ESU†† based on Rfree (Å)

0.125

Protein residues/atoms

228/1791

Water/Ions

193

  1. ahighest resolution shell.
  2. R sym  = S|Ii- < Ii > |/S|Ii| where Ii is the scaled intensity of the ith measurement and < Ii > is the mean intensity for that reflection.
  3. R meas is the redundancy-independent Rsym. [18, 19].
  4. R cryst  = S| |Fobs|-|Fcalc| |/S|Fobs| where Fcalc and Fobs are the calculated and observed structure factor amplitudes, respectively.
  5. §R free  = as for R cryst , but for 4.9% of total reflections chosen at random and omitted from refinement.
  6. This value represents the total B that includes TLS and residual B components.
  7. ESU = Estimated overall coordinate error [20].
  8. Values in parentheses are for the highest resolution shell. Space group: P1211. Unit cell parameters: a = 39.03 Å b = 58.82 Å c = 46.93 α = γ = 90° β = 93.51.