Table 1 Centre SNPs identified in top-1000/500 SNPs interactions on AMD dataset
From: Cloud computing for detecting high-order genome-wide epistatic interaction via dynamic clustering
# SNPs per | Centre SNPs from analyses of AMD dataset | |
|---|---|---|
interaction | Centre SNPs (Genomic position) | # Interacting SNPs |
| Â | rs380390 (Ch1: 196701051) | 524 |
| Â | rs1329428 (Ch1: 196702810) | 253 |
2 | rs1394608 (Ch5: 155783294) | 23 |
| Â | rs1740752 (Ch10: 38538771) | 20 |
| Â | rs1363688 (Ch5: 174609731) | 11 |
| Â | rs10512174 (Ch9: 88886574) | 11 |
| Â | rs380390 (Ch1: 196701051) | 709 |
| Â | rs1329428 (Ch1: 196702810) | 106 |
3 | rs1363688 (Ch5: 174609731) | 63 |
| Â | rs618499 (Ch11: 108148839) | 47 |
| Â | rs1926489 (Ch13: 92667989) | 35 |
| Â | rs3781868 (Ch11: 108059569) | 34 |
| Â | rs380390 (Ch1: 196701051) | 459 |
| Â | rs618499 (Ch11: 108148839) | 188 |
4 | rs3781868 (Ch11: 108059569) | 115 |
| Â | rs294278 (Ch3: 31127911) | 36 |
| Â | rs300780 (Ch2: 110819) | 35 |
| Â | rs315511 (Ch1: 84849116) | 28 |