From: Improved multi-level protein–protein interaction prediction with semantic-based regularization
Target predicates | |
---|---|
boundp(p,p’) | true iff the protein pair (p,p’) is bound |
boundd(d,d’) | true iff the domain pair (d,d’) is bound |
boundr(r,r’) | true iff the residue pair (r,r’) is bound |
Given predicates | |
parentpd(p,d) | true iff protein p is parent of domain d |
parentdr(d,r) | true iff domain d is parent of residue r |
parentpr(p,r) | true iff protein p is parent of residue r |
hasdom(p) | true iff protein p has at least one domain |
hasres(d) | true iff domain d has at least one residue |