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Figure 1 | BMC Bioinformatics

Figure 1

From: BAYSIC: a Bayesian method for combining sets of genome variants with improved specificity and sensitivity

Figure 1

Contingency table and posterior probabilities for SNP variant detection programs. Variants were detected jointly on ten samples from The 1000 Genomes Project using FreeBayes, SamTools, GATK, and Atlas as described in Methods. For each possible combination of agreement amongst the variant calling programs and dbSNP, the observed number of SNP variant positions and the posterior probability calculated by BAYSIC is shown.

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