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Figure 5 | BMC Bioinformatics

Figure 5

From: BAYSIC: a Bayesian method for combining sets of genome variants with improved specificity and sensitivity

Figure 5

Effect of variant calling programs used as input on sensitivity and specificity of BAYSIC. SNP variants were detected with BAYSIC using as input all possible combinations FreeBayes, SamTools, GATK and Atlas. The sensitivity and specificity of each set was then measured as in Figure 4 for SNPs occurring in coding regions (top) or non-coding regions (bottom). The sensitivity and specificity for each combination of input call sets and for a range of posterior probability cutoffs is shown.

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BMC Bioinformatics

ISSN: 1471-2105

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