Skip to main content

Table 5 Validation of KD4i by 10 fold cross-validation

From: A comprehensive study of small non-frameshift insertions/deletions in proteins and prediction of their phenotypic effects by a machine learning method (KD4i)

Fold

Accuracy

Sensitivity

Specificity

Precision

NPV

MCC

0

77%

87%

67%

76%

81%

0.55

1

83%

93%

74%

78%

91%

0.68

2

78%

85%

71%

76%

81%

0.56

3

79%

96%

63%

72%

94%

0.62

4

78%

88%

68%

74%

85%

0.57

5

73%

86%

60%

67%

82%

0.48

6

77%

85%

71%

73%

83%

0.56

7

82%

90%

74%

79%

87%

0.65

8

83%

85%

81%

83%

83%

0.66

9

79%

90%

65%

76%

85%

0.58

Average

79%

89%

69%

75%

85%

0.59

  1. NPV: negative prediction value, MCC: Matthews Correlation Coefficient.