Table 3 Time usage of database searching (minutes)
From: Accelerating the scoring module of mass spectrometry-based peptide identification using GPUs
Search engines | Time distribution | Exp. 1 | Exp. 2 | Exp. 3 |
|---|---|---|---|---|
X!Tandem | Total time | 45 | 1011 | 253 |
| Â | Scoring time | 24 | 566 | 138 |
| Â | Scoring time percentage | 54% | 56% | 55% |
pFind | Total time | 22 | 601 | 132 |
| Â | Scoring time | 18 | 530 | 107 |
| Â | Scoring time percentage | 82% | 89% | 81% |