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Table 1 Dataset description

From: Protein-specific prediction of mRNA binding using RNA sequences, binding motifs and predicted secondary structures

Dataset

 

No. proteins

No. of targets

Type

AURA_dataset

    
 

RBP+

15

8086

positive dataset

 

3K-

-

3000

negative dataset

PUM2_dataset

    
 

PUM2+

1

2151

positive dataset

 

PUM2-

1

3000

negative dataset

iAGO2_dataset

    
  

1

5951

positive dataset

  

1

5841

negative dataset

  1. A short description of the dataset compositions, the number of proteins in each dataset and the sum of the target sequences. A more detailed description of the AURA_dataset and the number of target sequences used for training can be found in Table 2, first and second column.
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BMC Bioinformatics

ISSN: 1471-2105

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