Skip to main content

Table 2 iMetAMOS average runtime on 225 M. tuberculosis samples

From: Automated ensemble assembly and validation of microbial genomes

Step

Average time (h)

Assemble

4.10

Validate

4.19

FindORFS

9.09

Classify

8.26

Total

32.25

  1. The table lists the average run per sample for the longest-running steps within iMetAMOS. Timings were collected on a 16-core 2.4GHz AMD with 32G RAM. Full runtime details are available in Additional file 2.
Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us