From: gsGator: an integrated web platform for cross-species gene set analysis
Tool name | Annotation types | Multiple GSA | Cross-species GSA | Set operation (-,∩,∪) | Network analysis & visualization | No. species | Ref. | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
GO & pathway | Genomic annotation | Molecular network | Phenotype | miRNA target | |||||||
gsGator | O | O | O | O | O | O | O | O | O | 7 species | |
DAVID | O | O | O | O | O | O | All species | [1] | |||
g:Profiler | O | O | O | O | O | O | 85 species | [4] | |||
Algal Functional Annotation Tool | O | O | 2 fungal species | [10] | |||||||
GeneTerm Linker | O | O | H. sapiens yeast | [11] | |||||||
KOBAS 2.0 | O | O | O | 1327 species | [12] | ||||||
ADGO 2.0 | O | O | 8 species | [13] | |||||||
ToppCluster | O | O | O | O | O | O | H. sapiens | [6] | |||
PhenoFam | O | 48 species | [14] | ||||||||
agriGO | O | 38 species | [15] | ||||||||
Lists2Networks | O | O | O | O | O | O | O | O | Mammals | [16] | |
GeneCodis3 | O | O | O | O | 16 species | [2] | |||||
FuncAssociate (ver 2.0) | O | 37 species | [17] | ||||||||
GeneWeaver | O | O | O | O | O | O | 9 species | [18] |