Table 2 Illustrative biclusters passing the GO term-enrichment test at 1% and 5% significance levels after Bonferroni correction
From: BicSPAM: flexible biclustering using sequential patterns
Dataset | ♯Genes | ♯Conds | ♯Preced. | ♯Items | Notes | ♯p-values | ♯p-values | Best |
|---|---|---|---|---|---|---|---|---|
| Â | Â | Â | Â | Â | Â | <0 .01 | [0.01,0.05] | p-value |
Dlbcl | 179 | 6 | 4 | 20 | No closing options | 5 | 2 | 3.12E-4 |
Dlbcl | 207 | 9 | 5 | 25 | Merging allowed | 6 | 1 | 2.33E-5 |
Yeast | 167 | 5 | 3 | 10 | No closing options | 11 | 3 | 2.12E-4 |
Yeast | 240 | 8 | 4 | 15 | Extensions allowed | 10 | 1 | 7.13E-7 |
Colon | 769 | 6 | 4 | 25 | Merging allowed | 12 | 2 | 6.08E-8 |
Leukemia | 1645 | 6 | 3 | 20 | Extensions allowed | 9 | 2 | 3.47E-9 |