HECTOR: a parallel multistage homopolymer spectrum based error corrector for 454 sequencing data

BMC Bioinformatics

Table 2 Correction quality results of HECTOR and Coral for the simulated datasets in terms of recall, specificity, gain, precision and F-score

Group	Dataset	Error corrector	Recall	Specificity	Gain	Precision	F-Score
A	1	HECTOR	92.81	99.99	90.62	97.69	95.19
		Coral	86.06	99.99	85.01	98.80	91.99
	2	HECTOR	92.85	99.99	90.61	97.64	95.19
		Coral	89.47	99.99	88.54	98.97	93.98
	3	HECTOR	92.85	99.99	90.57	97.60	95.17
		Coral	90.18	99.99	89.37	99.11	94.43
	4	HECTOR	92.84	99.99	90.55	97.59	95.16
		Coral	90.95	99.99	90.13	99.10	94.85
	5	HECTOR	92.82	99.99	90.71	97.78	95.23
		Coral	85.63	99.99	84.08	98.22	91.50
	6	HECTOR	92.88	99.99	90.72	97.73	95.24
		Coral	89.30	99.99	87.89	98.44	93.65
	7	HECTOR	92.86	99.99	90.62	97.65	95.19
		Coral	90.11	99.99	88.77	98.54	94.13
	8	HECTOR	92.83	99.99	90.57	97.62	95.17
		Coral	90.35	99.99	89.06	98.59	94.29
B	9	HECTOR	93.19	99.99	89.99	96.69	94.90
		Coral	90.03	99.99	89.09	98.98	94.29
	10	HECTOR	93.19	99.98	89.93	96.62	94.87
		Coral	90.39	99.99	89.47	98.99	94.50
	11	HECTOR	93.17	99.98	89.89	96.60	94.85
		Coral	91.67	99.99	90.78	99.03	95.21
	12	HECTOR	93.17	99.98	89.90	96.61	94.86
		Coral	92.12	99.99	91.28	99.09	95.48
	13	HECTOR	93.13	99.99	89.89	96.63	94.85
		Coral	89.81	99.99	88.19	98.23	93.83
	14	HECTOR	93.14	99.98	89.83	96.57	94.82
		Coral	91.80	99.99	90.32	98.41	94.99
	15	HECTOR	93.14	99.98	89.83	96.56	94.82
		Coral	91.95	99.99	90.32	98.26	95.00
	16	HECTOR	93.13	99.98	89.83	96.58	94.82
		Coral	92.06	99.99	90.43	98.26	95.06

ISSN: 1471-2105