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Table 1 Comparative results for the synthetic dataset 2

From: Fold change rank ordering statistics: a new method for detecting differentially expressed genes

Method

Thresholds

Selection

False

Error

AUC

FCROS

0.002348226, 0.998

198

2

1.0%

0.9999928

FC

1.5922

198

1

0.5%

0.9999933

WAD

1.2072

198

17

8.5%

0.9981039

RP

0.00009

198

1

0.5%

0.9999985

Ttest

0.00059892

198

6

3%

0.9999356

SAM

0.0007

198

3

1.5%

0.9999691

TREAT

0.00078531

198

1

0.5%

0.9999990

  1. Synthetic dataset 2: Selection, errrors and AUC for the seven methods. Error is calculated as the number of false genes detected divided by 198, the number of true DE genes in the dataset.
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BMC Bioinformatics

ISSN: 1471-2105

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