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Table 3 Comparative results for six microarray datasets (a)

From: Fold change rank ordering statistics: a new method for detecting differentially expressed genes

Dataset Method Thresholds Selection Runtime (s) Error
DLBCL FCROS 0.0228, 0.9773 424 4.79 4.55%
(n = 7129) FC 1.444 425 0.13 na
(m1 = 58, m2 = 19) WAD 1.1575 424 0.14 na
  RP 0 425 656.36 0%
  Ttest 0.0001 428 1.48 0.17%
  SAM 0.00032 427 26.66 0.5%
  TREAT 0.0025 425 0.16 4.19%
Prostate FCROS 0.0356, 0.9644 1009 19.58 7.12%
(n = 12625) FC 1.27 1008 0.3 na
(m1 = 50, m2 = 52) WAD 1.0805 1010 0.32 na
  RP 0 1010 2491.54 0%
  Ttest 0.00068 1008 2.72 0.85%
  SAM 0.00041 1013 55.6 0.51%
  TREAT 0.0153 1010 0.33 19.12%
Colon FCROS 0.0187, 0.9802 95 0.99 3.85%
(n = 2000) FC 1.8 95 0.05 na
(m1 = 22, m2 = 40) WAD 1.346 95 0.08 na
  RP 0 96 168.78 0%
  Ttest 0.00015 97 0.5 0.3%
  SAM 0.00055 95 7.08 1.15%
  TREAT 0.00028 95 0.06 0.58%
Leukemia FCROS 0.028, 0.9717 493 4.7 5.63%
(n = 7129) FC 1.942 494 0.12 na
(m1 = 47, m2 = 25) WAD 1.1668 494 0.17 na
  RP 0 494 768.65 0%
  Ttest 0.00052 494 1.43 0.75%
  SAM 0.00051 494 28.71 0.74%
  TREAT 0.00153 494 0.13 2.2%
Myeloma FCROS 0.01296, 0.987 450 34.77 2.59%
(n = 12625) FC 1.5189 452 0.4 na
(m1 = 36, m2 = 137) WAD 1.212 449 0.49 na
  RP 0 451 4721.73 0%
  Ttest 0.0051 449 2.9 14.34%
  SAM 0.0055 450 94.84 15.43%
  TREAT 0.0192 451 0.54 53.75%
ALL-1 FCROS 0.0355, 0.9644 1187 22.72 7.11%
(n = 12625) FC 1.4176 1187 0.5 na
(m1 = 95, m2 = 33) WAD 1.1165 1185 0.64 na
  RP 0 1188 3108.43 0%
  Ttest 0.000057 1186 2.66 0.06%
  SAM 0.000145 1187 69.48 0.15%
  TREAT 0.00117 1184 0.26 1.25%
  1. Comparative results for six microarray datasets (na = not available).