From: Transcriptome dynamics-based operon prediction in prokaryotes
Genome | Conditions | Description (growth condition) | Code | Accession |
---|---|---|---|---|
H. somni | 1 | A single nucleotide resolution transcriptome profile | HS | GSE29578 |
P. gingivalis | 3 | MIN - Defined minimal medium | PG1 | GSE30452 |
TSB - Trypticase soy broth | PG2 | |||
BAPH - Sheep blood agar | PG3 | |||
E. coli | 2 | WT in LB + αMG | EC1 | GSM1104387-89 |
WT in LB –αMG | EC2 | GSM1104390-92 | ||
S. enterica | 2 | WT (15 minutes after αMG stress) | SE1 | GSM1104438 |
WT (30 minutes after αMG stress) | SE2 | GSM1104439 |