Table 6 Comparison of bootstrap 95% percentile confidence interval of average F-measure between the minimum energy structures and the maximum accuracy structures of the HK-PK and the HK-PK-free data sets
From: A fast and robust iterative algorithm for prediction of RNA pseudoknotted secondary structures
Input structures | Min energy | Max accuracy | Permutation test |
|---|---|---|---|
Iter. HFold - hotspots PKed | (72.83, 83.37) | (78.56, 87.05) | Not significant |
Iter. HFold - hotspots PK-free | (74.93, 80.26) | (87.70, 90.57) | Significant |
Iter. HFold - 50 suboptimals PKed | (67.70, 79.57) | (80.41, 88.14) | Significant |
Iter. HFold - 50 suboptimals PK-free | (76.27, 81.46) | (90.05, 93.00) | Significant |
HotKnots PKed | (73.60, 83.35) | (84.50, 91.48) | Significant |
HotKnots PK-free | (76.74, 81.95) | (88.32, 91.08) | Significant |