Skip to main content

Table 1 Statistics of domain-level ortholog clustering results

From: Improvement of domain-level ortholog clustering by optimizing domain-specific sum-of-pairs score

COG03 dataset

FAMILY210 dataset

Method

No. of clusters

Method

No. of clusters

 

N clust

N clust split

 

N clust

N clust split

COG

4814

1389 (29%)

eggNOG

64983

2333 (3.6%)

DomClust

7503

2439 (33%)

DomClust

60775

15879 (26%)

DomRefine

7308

1562 (21%)

DomRefine

57644

10942 (19%)

  1. N clust denotes the total number of clusters. N clust split denotes the number of clusters that include proteins split into domains. The ratio of split clusters to the total number of clusters is shown in parenthesis.