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Table 1 Validation results of the seven disjoint mutation sets shown in Figure 1

From: Combining calls from multiple somatic mutation-callers

Combination

Val.

FP

TP

cFP

cTP

call status

rate (%)

count

count

rate

rate

All callers

99.4

12

1,914

1.2

55.3

Caller A and C only

96.4

11

294

2.4

63.8

Caller A and B only

96.3

7

184

3.1

69.1

Caller B and C only

94.4

2

34

3.3

70.1

Caller C only

79.6

11

43

4.4

71.3

Caller A only

59.7

632

935

69.1

98.4

Caller B only

15.9

302

57

100

100

  1. For each mutation set (row), the validation rate (Val. rate), the false positive (FP) and true positive (TP) counts, and the cumulative false positive (cFP) and cumulative true positive (cTP) rates in percentage, are presented. Mutation sets are ordered by the validation rate.
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