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Table 2 Summary of the genotype calling algorithms compared

From: KRLMM: an adaptive genotype calling method for common and low frequency variants

Method

Normalization

Clustering model

GenCall [11]

W

B

Illuminus [13]

W

B

GenoSNP [12]

W

W

OptiCall (v 0.6.2) [8]

W

W/B

KRLMM

B

B

  1. Key: W - within sample method; B - between sample method.
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BMC Bioinformatics

ISSN: 1471-2105

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