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Table 2 Likelihoods of the three diploid genotypes ( m = 2)

From: Population genetic analysis of bi-allelic structural variants from low-coverage sequence data with an expectation-maximization algorithm

Genotype (g)

Likelihood

0

ε r l 1 - ε a k - l

1

1 1 + λ k ε r + λ - λ ε r l 1 - ε a + λ ε a k - l

2

1 - ε r l ε a k - l