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Table 3 T-PIP performance on DS120 and DS236 according to DBMK categories

From: Scoring docking conformations using predicted protein interfaces

Predictor & Categories

Precision

Recall

F1

Accuracy

MCC

T-PIP DS120

52.6

56.1

52.5

85.4

45.1

 

Rigid Body (86chains)

57.1

61.3

57.3

86.7

50.7

 

Medium-Difficulty (18 chains)

42.0

50.8

44.5

84.5

35.9

 

Difficult (16 chains)

42.9

34.0

35.8

79.2

26.2

T-PIP DS236

53.2

55.3

52.1

85.3

44.8

 

Rigid Body (156 chains)

56.8

59.4

56.2

86.7

49.5

 

Medium-Difficulty (44 chains)

45.1

52.2

47.0

85.6

39.3

 

Difficult (34 chains)

46.9

37.6

38.5

78.4

28.6