Data set | Description | Platform | Source | # of probes after preprocessing | # of samples |
---|---|---|---|---|---|
1 | Colon cancer | HM27 | Local | 19,965 | 20 NONCIMP vs. 6 CIMP |
2 | Glioblastoma | HM27 | TCGA, plate 1,2,3,10 | 20,549 | 74 NONCIMP vs. 12 CIMP |
3 | Glioblastoma | HM450 | TCGA, plate 79,111,130 | 374,601 | 93 NONCIMP vs. 6 CIMP |
4 | Kidney | HM27 | TCGA, plate 64 | 21,624 | 50 KIRC vs. 45 normal |
5 | Kidney | HM450 | TCGA, all KIRC | 374,708 | 283 KIRC vs.160 normal |
6 | Breast | HM27 | TCGA, plate 93 | 21,787 | 37 Infiltrating Ductal Carcinoma vs. 20 normal |
7 | Breast | HM450 | TCGA, plate 109 | 377,853 | 56 Infiltrating Ductal Carcinoma vs. 17 normal |
8 | Normal blood | HM450 | GEO:GSE40279, plate 2 | 383,911 | 84 blood samples |