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Figure 4 | BMC Bioinformatics

Figure 4

From: A model-based information sharing protocol for profile Hidden Markov Models used for HIV-1 recombination detection

Figure 4

Restricted search of the space of source combinations. The heuristics described in Section ‘Details on the information sharing protocol - Restricting the search space’ is illustrated. In this example, we assume 4 subtypes A, B, C, and D. In each line a source combination is given, with the source combination in each S ̄ i being grouped. The most likely source combinations in each S i ̄ is colored in red. The arrows indicate how the spaces S ̄ 1 ,, S ̄ 4 are traversed during the search process.

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