Table 2 Overview of the datasets used
Data ID | Tissue | Treatment |
|---|---|---|
GSE7895 | Bronchial Brushing | Smokers (30), non-smokers (20), former smokers (51) |
GSE19667 | Bronchial Brushing | Smokers (65), non-smokers (45) |
GSE12251 & GSE1480 | Colonic biopsies | Responders (20) and non-responders (27) pre-treatment |
GSE16879 | Colonic biopsies | Responders (8) and non-responders (16) pre-/post-treatment |
E-MTAB-1842, GSE50254 | Rat parenchyma | Main stream smoke (8, 15, or 23 μg nicotine/l) or fresh air. 5 animals per group. |
E-MTAB-1272 | NHBE cells | 2, 4, 6 and 8 hours after washing of CDK4/6 inhibitor. 3 samples per group. |
E-MTAB-1311 | NRBE cells | Vehicle control or TNF α (0.1, 1, 10, 100 ng/ml) × (30 min, 2 h, 24 h). 3 samples per group |