From: HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data
Type | IP_1 vs. control | IP_2 vs. control | IP_3 vs. control | |||
---|---|---|---|---|---|---|
A | B | A | B | A | B | |
Unique reads (million) | 16.9 | 22.27 | 21.08 | 22.66 | 25.36 | 29.15 |
Overlapped peaks | 62184 | 62407 | 41455 | 41551 | 54309 | 54354 |
Unique peaks | 7206 | 1689 | 5233 | 238 | 3348 | 857 |
Unique peaks w/ motif | 2552 | 670 | 1359 | 35 | 1121 | 362 |
Unique peaks w/o motif | 4654 | 1019 | 3874 | 203 | 2227 | 495 |
Total peaks | 69390 | 64096 | 46688 | 41789 | 57657 | 55211 |