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Table 9 Runtime for scaffolders on Staphylococcus aureus

From: BESST - Efficient scaffolding of large fragmented assemblies

 

Runtime (hh:mm:ss)

Assembly

BESST

OPERA

SOPRA

SSPACE

ABySS

00:00:40

00:28:47

01:18:24

00:00:26

Allpaths

00:00:25

00:00:47

00:11:56

00:00:20

Bambus2

00:00:26

00:00:49

00:22:11

00:00:21

MSR-CA

00:00:26

00:01:05

00:19:21

00:00:21

SGA

00:01:03

00:05:58

04:30:08

00:00:51

SOAPdenovo

00:00:25

00:00:50

00:26:51

00:00:19

Velvet

00:00:27

00:00:53

00:39:25

00:00:21