Figure 2
From: APTE: identification of indirect read-out A-DNA promoter elements in genomes
The five selected sequences and their predicted binding proteins. Each of the putative promoter elements (ppe) sequences are within 500 bp 5′ of the transcription start site of the genes-gdi3, gtf2, kif27, thrsp and unknown1, The key elements with potential gene regulatory function are underlined with grey arrows. The black arrow above each oligonucleotide indicates a putative transcription factor binding site and its direction of binding. The putative transcription factor binding sites were predicted using the EMBOSS database run through Geneious R7 7.1.4.