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Figure 8 | BMC Bioinformatics

Figure 8

From: AliGROOVE – visualization of heterogeneous sequence divergence within multiple sequence alignments and detection of inflated branch support

Figure 8

AliGROOVE results of concatenated gene analyses on unreduced and reduced 61-taxon simulation setup D. AliGROOVE similarity score distance matrices and associated ML topologies of the original supermatrix and the taxon reduced supermatrix, including all 20 gene partitions. The darker blue the colour coded similarity scores in AliGROOVE matrices, the higher the non-randomized accordancy between pairwise sequence comparisons. Red indicates the opposite. Tagged branch reliability of associated best ML topologies is given next to each matrix. Correct reconstructed topologies are pointed blue, incorrect trees red. Names of incorrectly resolved sequences are highlighted red.

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BMC Bioinformatics

ISSN: 1471-2105

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