Figure 5
From: Critical assessment of coalescent simulators in modeling recombination hotspots in genomic sequences
LDhat 2.2 rhomap estimation results of recombination rates for simulation data of a 200-kb DNA sequence for five runs for detecting recombination hotspots in a single simulation data set (top panel; five different colors denote these different runs) (368 SNPs; a total of 100 DNA sequences was simulated based on a 1-hotspot model by MaCS) versus cross-over hotspot peaks revealed by the likelihood ratio graph generated by sequenceLDhot (bottom panel).