Figure 1
From: Personalized Oncology Suite: integrating next-generation sequencing data and whole-slide bioimages
Software architecture of POS. The JBoss Application Server of POS is shown as the central rectangle containing different JSF libraries. On the right hand side the attached Authorization and Authentication System (AAS) is depicted. POS uses PostgreSQL as database management system and applies EclipseLink for the object-relational mapping. The Bioconductor package Gviz handles rendering of the genome browser tracks, and the R package Rserver provides an R server available through a network connection. On top, distributed Bisque instances are shown. The POS Image Uploader, a JavaFX based standalone application, is outlined on the top left in the figure. This application enables users to upload several images at once.