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Table 8 Number of CpGs with a given coverage from the RRBS dataset

From: Bison: bisulfite alignment on nodes of a cluster

Coverage

Bismark

Bison

BSMAP

BSmooth

BS-Seeker2

GNUMAP-bs

> = 1x

42,390

63,524

38,430

32,371

81,743

56,750

> = 3x

34,684

53,757

32,638

27,609

67,352

45,272

> = 5x

31,212

48,548

29,828

25,418

60,822

38,863

> = 10x

25,819

39,945

25,596

21,576

50,937

28,428

> = 30x

13,768

21,768

16,568

12,987

31,612

11,382

> = 50x

8,078

12,942

11,310

8,271

21,484

5,449

> = 100x

2,530

4,009

4,373

3,033

9,104

1,464