From: FastMG: a simple, fast, and accurate maximum likelihood procedure to estimate amino acid replacement rate matrices from large data sets
Matrices
Frequencies
Exchangeability matrix
HSSP 8 R / HSSP 8 T
0.992/0.986
0.989/0.991
HSSP 16 R / HSSP 16 T
0.996/0.993
0.992/0.996
HSSP 24 R / HSSP 24 T
0.998/0.995
0.994/0.997
HSSP 32 R / HSSP 32 T
0.998/0.997
0.995/0.998
HSSP 64 R / HSSP 64 T
0.999/0.999
0.997/0.999