M1 | M2 | LogLK (M1-M2) | M1 > M2 (#TP) | M1 < M2 (#TP) | #M1 > M2 (#TP) | #M1 < M2 (#TP) |
---|
HSSPS |
| 0.02 | 201 (130) | 99 (65) | 66 (27) | 12 (4) |
HSSPS |
| 0.01 | 208 (126) | 92 (64) | 69 (26) | 10 (4) |
HSSPS |
| 0.01 | 203 (114) | 97 (72) | 72 (26) | 9 (5) |
HSSPS |
| 0.01 | 206 (119) | 94 (59) | 69 (24) | 11 (4) |
HSSPS |
| 0.01 | 200 (101) | 100 (63) | 73 (16) | 11 (4) |
HSSPS |
| 0.01 | 191 (124) | 109 (75) | 43 (19) | 33 (15) |
HSSPS |
| 0.00 | 152 (95) | 148 (81) | 26 (5) | 34 (9) |
HSSPS |
| 0.00 | 142 (88) | 158 (89) | 19 (4) | 36 (11) |
HSSPS |
| 0.00 | 132 (78) | 168 (87) | 18 (3) | 32 (6) |
HSSPS |
| 0.00 | 131 (72) | 169 (80) | 15 (4) | 40 (4) |
- LogLK: the log likelihood difference per site between trees inferred using M1 and M2; a positive (negative) value means M1 is better (worse) than M2. M1 > M2: the number of alignments where M1 results in better likelihood value than M2; #TP: the number of alignments where tree topologies inferred using M1 and M2 are different. #M1 > M2 (p <0.05): the number of alignments where the Kishino-Hasegawa test indicates that M1 is significantly better than M2. #M1 < M2 (p <0.05): the same as #M1 > M2, but now M2 is significantly better than M1.