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Table 4 Filtration of 500k reads of length 100bp on HG18

From: Improving read mapping using additional prefix grams

Mapper

Filtration time (min:sec)

Number of candidates

Hobbes2

04:14

1,161,828,591

Hobbes

01:45

3,833,554,010

Masai

09:48

1,190,600,997

RazerS3

15:01

7,007,527,711

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BMC Bioinformatics

ISSN: 1471-2105

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