Table 2 Data set properties
From: PSEUDOMARKER 2.0: efficient computation of likelihoods using NOMAD
Data set | Pedigrees | Average | Singleton | Singleton | Number of | Maxium |
|---|---|---|---|---|---|---|
| Â | Â | pedigree size | cases | controls | markers | alleles/marker |
fin1 | 61 | 15.33 | 200 | 200 | 3 | 2 |
fin2 | 84 | 13.08 | 200 | 200 | 3 | 2 |
fin3 | 37 | 13.24 | 100 | 100 | 4 | 4 |
fin4 | 438 | 5.79 | 0 | 199 | 3 | 2 |
fin5 | 61 | 15.33 | 200 | 200 | 4 | 8 |
fin6 | 61 | 15.33 | 200 | 200 | 1 | 18 |
x.linked | 482 | 3.17 | 112 | 203 | 1 | 20 |
100sibs | 100 | 4.00 | 0 | 0 | 1 | 3 |
100sibs.c | 100 | 4.00 | 200 | 0 | 1 | 3 |
100sibs.cc | 100 | 4.00 | 200 | 200 | 1 | 3 |
mixed | 180 | 5.22 | 0 | 50 | 6 | 3 |
noparents | 200 | 4.50 | 100 | 100 | 2 | 4 |
FHS | 216 | 27.68 | 0 | 0 | 2181 | 2 |
FinnTwin12 | 171 | 3.46 | 0 | 0 | 8502 | 2 |