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Figure 5 | BMC Bioinformatics

Figure 5

From: FISH Amyloid – a new method for finding amyloidogenic segments in proteins based on site specific co-occurence of aminoacids

Figure 5

Final co-occurrence matrix. Graphical representation of the final co-localization matrix on extended experimental dataset. Large matrix coordinates represent the location of aminoacids couples, obtained from the 5-residue sliding window. The most frequent couples of aminoacids, which indicate the classification pattern, assume the darkest colors of dots. Aminoacids are denoted with small numbers, ordered alphabetically (A = 1, C = 2, D = 3, E = 4, F = 5, G = 6, H = 7, I = 8, K = 9,L = 10, M = 11, N = 12, P = 13, Q = 14, R = 15, S = 16, T = 17, V = 18, W= 19, Y = 20).

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