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Figure 4 | BMC Bioinformatics

Figure 4

From: iview: an interactive WebGL visualizer for protein-ligand complex

Figure 4

Tailor-made version of iview specifically for visualizing docking results of user-submitted jobs. It displays the user-supplied search space in the form of a cubic box so that the binding site is visually depicted. It displays the top hit ligand IDs in a horizontally scrollable row and provides a straightforward way to switch ligands easily. It lists the docking result files, predicted binding affinity values, molecular properties, compound suppliers and annotations, and putative hydrogen bonds, in order to give users a quick overview of the top hit ligands, and assist them in making decisions of which compounds to purchase for subsequent wet-lab experiments. This figure can be reproduced at http://istar.cse.cuhk.edu.hk/idock/iview/?525a0abab0717fe31a000001.

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