Figure 7
From: Analysing RNA-kinetics based on folding space abstraction
The alternating structures of the c-di-GMP riboswitch of the tfoX gene from C. desulforudis audaxviator MP104C. We took the native structures proposed in [26] and used them as constraints to predict the energetically optimal structure using RNAFOLD. These results were then mapped to the corresponding hishapes. Δ G is the free energy in k c a l/m o l, and hishape represents the π h hishape.