Table 4 Selection performance of different methods in different scenarios (OR = 1.3)
From: Stability SCAD: a powerful approach to detect interactions in large-scale genomic study
| Â | Method | Scenario | ||
|---|---|---|---|---|
A3 | B3 | C3 | ||
TPR | LASSO | 0.681(0.032) | 0.664(0.023) | 0.777(0.021) |
SCAD | 0.715(0.028) | 0.678(0.023) | 0.7853(0.022) | |
SLASSO | 0.651(0.019) | 0.692(0.012) | 0.874(0.012) | |
SSCAD | 0.835(0.014) | 0.808(0.005) | 0.878(0.005) | |
MCC | LASSO | 0.173(0.018) | 0.298(0.018) | 0.303(0.016) |
SCAD | 0.253(0.016) | 0.350(0.017) | 0.312(0.014) | |
SLASSO | 0.676(0.012) | 0.600(0.015) | 0.768(0.013) | |
SSCAD | 0.736(0.012) | 0.737(0.014) | 0.778(0.019) | |
AUC | LASSO | 0.506(0.018) | 0.524(0.003) | 0.536(0.006) |
SCAD | 0.517(0.021) | 0.514(0.006) | 0.536(0.006) | |
SLASSO | 0.518(0.002) | 0.545(0.005) | 0.535(0.005) | |
SSCAD | 0.537(0.005) | 0.541(0.002) | 0.551(0.002) | |
FDR | LASSO | 0.869(0.015) | 0.838(0.011) | 0.798(0.010) |
SCAD | 0.832(0.013) | 0.819(0.008) | 0.726(0.009) | |
SLASSO | 0.188(0.007) | 0.164(0.006) | 0.182(0.010) | |
SSCAD | 0.169(0.006) | 0.163(0.007) | 0.174(0.008) | |