Stability SCAD: a powerful approach to detect interactions in large-scale genomic study

BMC Bioinformatics

Table 8 Empirical selection probability of significant SNP pairs in Nanjing study by the _S SCAD

SNP1(rs)	Gene1	SNP2(rs)	Gene2	^a Π
SNP1(rs)	Gene1	SNP2(rs)	Gene2	Nanjing study _SSCAD
rs929087	FASLG	rs12544802	PTK2	0.904
rs2853462	CHRNG	rs7856889	MUSK	0.876
rs2736100	TERT	rs40318	PIK3R1	0.830
rs7445640	TERT	rs10733579	MUSK	0.786
rs411751	PIK3R1	rs939269	PTK2B	0.756
rs7839119	PTK2	rs4524871	MUSK	0.734
rs7839119	PTK2	rs12544802	PTK2	0.702
rs725787	PTK2B	rs5998196	YWHAH	0.692
rs3781626	RAPSN	rs6018348	SRC	0.680
rs4946933	FOXO3	rs11231740	BAD	0.640
rs6578141	PTK2	rs1940245	MUSK	0.604

^aΠ represents a predictor’s empirical probability of model inclusion under 500 times subsampling.

ISSN: 1471-2105