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Table 4 SNP-miRNA pairs not predicted to disturb the miRNA bindings by mrSNP on the SNPs - miRNA couples obtained from miRdSNP because neither SNP allele is predicted to bind the miRNAs

From: mrSNP: Software to detect SNP effects on microRNA binding

SNP miRNA Chr Position Alleles Success Explanation
rs16952475 hsa-miR-185 15 69018917 C T × miRNA is predicted not to bind neither of the sequences. There are 6 consecutive matches, the binding energy is lower than cut off. The SNP further introduces GU wobble on 5th position.
rs17168525 hsa-let-7b 7 135613262 A G × miRNA is predicted not to bind neither of the sequences. There are 6 consecutive matches, the binding energy is lower than cut off. The SNP further introduces GU wobble on 5th position.
rs1802677 hsa-miR-181b 22 33258866 A T × miRNA is predicted not to bind neither of the sequences. There are 6 consecutive matches, the binding energy is lower than cut off. The SNP further breaks the match on 4th position.
rs56165498 hsa-miR-29a 15 68595075 A C × miRNA is predicted not to bind neither of the sequences. There are 6 consecutive matches, the binding energy is lower than cut off. The SNP further breaks the match on 5th position.
rs57321187 hsa-miR-192 10 79550563 C T × miRNA is predicted not to bind neither of the sequences. There are 6 consecutive matches, the binding energy is lower than cut off. The SNP further breaks the match on 6th position.
rs62062994 hsa-miR-29b 17 48261978 G T × miRNA is predicted not to bind neither of the sequences. There are 6 consecutive matches, the binding energy is lower than cut off. The SNP further breaks the match on 3rd position.
rs62062994 hsa-miR-29c 17 48261978 G T × miRNA is predicted not to bind neither of the sequences. There are 6 consecutive matches, the binding energy is lower than cut off. The SNP further breaks the match on 3rd position.
rs7233791 hsa-miR-124 18 47309884 C G × miRNA is predicted not to bind neither of the sequences. There are 6 consecutive matches, the binding energy is lower than cut off. The SNP further breaks the match on 5th position.
rs73954984 hsa-miR-17 2 111925932 C T × miRNA is predicted not to bind neither of the sequences. There are 6 consecutive matches, the binding energy is lower than cut off. The SNP further breaks the match on 7th position.
rs1804734 hsa-miR-21 1 203278606 A G × miRNA is predicted not to bind neither of the sequences. There are 7 consecutive matches with a GU wobble, the binding energy is lower than cut off. The SNP further breaks the match on 6th position.
rs3802782 hsa-let-7b 11 69468919 T C × miRNA is predicted not to bind neither of the sequences. There are 7 consecutive matches with a GU wobble, the binding energy is lower than cut off in both. The SNP is on 11th position, it further reduces the binding energy.
rs3218074 hsa-miR-503 19 30315176 A G × miRNA is predicted not to bind neither of the sequences. There are 7 consecutive matches with a GU wobble, the binding energy is lower than cut off. The SNP further introduces GU wobble on 1st position.
rs1803045 hsa-miR-1 12 49330252 C T × miRNA is predicted not to bind neither of the sequences. There are 6 consecutive matches with a GU wobble, min. match criteria cannot be satisfied in both. The SNP is on 12th position, it further reduces the binding energy.