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Table 3 Concordance rates at copy number gain and copy number normal regions

From: BCRgt: a Bayesian cluster regression-based genotyping algorithm for the samples with copy number alterations

Method

Overall concordance at CN gain region

Heterozygous call concordance at CN gain region

Homozygous call concordance at CN gain region

BCRgt

99.56%

98.76%

99.80%

BRLMM

99.14%

96.95%

99.88%