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Table 1 This table shows the p values when testing the difference in path length between residues that are close versus far apart

From: A graph theoretic approach to utilizing protein structure to identify non-random somatic mutations

Close vs. Far

Method

Residue distance

GraphPAC- Cheapest

GraphPAC- Farthest

GraphPAC- Nearest

<5 Å vs >25Å

9.50 E-143

2.10 E-141

1.38 E-145

<10 Å vs >30Å

9.32 E-147

5.82 E-145

2.81 E-149

<15 Å vs >35Å

2.91 E-151

1.01 E-148

1.33 E-153

<20 Å vs >40Å

1.42 E-155

1.63 E-151

7.15 E-158

  1. The left column shows the requirement to label two residues as close or far apart. For instance, " <5Å versus >25Å" signifies that residues that are less than <5Å apart are labeled as close while residues that are >25Å apart are considered far apart. The p-values for each method are shown in columns 2–4.
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BMC Bioinformatics

ISSN: 1471-2105

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