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Table 3 Segmentation results

From: A generic classification-based method for segmentation of nuclei in 3D images of early embryos

Model

Time

TP

FN

FP

Recall

Precision

F-measure

C. elegans

T86

43

1

0

0.977

1

0.988

C. elegans

T122

63

3

0

0.95

1

0.979

C. elegans

Total (1–128)

3585

21

2

0.9923

0.9997

0.9960

Drosophila

T5

98

0

3

1

0.97

0.985

Drosophila

T9

172

0

3

1

0.983

0.99

Drosophila

T25

254

3

3

0.988

0.988

0.988

Drosophila

Total (1–30)

4820

15

77

0.9969

0.9843

0.9905

Synthetic

Total (1–76)

1974

0

0

1

1

1

  1. TP = True Positive (ground truth number of objects). FN = False Negative (non detected). FP = False Positive (noisy detected). Recall = TP/(TP + FN). Precision = TP/(TP + FP). F = 2*precision*recall/(precision + recall).