From: Consistency of metagenomic assignment programs in simulated and real data
A sample | B sample | |||||
---|---|---|---|---|---|---|
Assigned by Phymm as | Assigned by NBC as | % | Assigned by Phymm as | Assigned by NBC as | % | |
Domain | Virus | Bacteria | 89.92 | Virus | Bacteria | 87.5 |
Archaea | Bacteria | 3.57 | Virus | Archaea | 4.6 | |
Virus | Archaea | 2.69 | Bacteria | Virus | 3.72 | |
Bacteria | Archaea | 2.08 | Archaea | Bacteria | 2.46 | |
Bacteria | Virus | 1.74 | Bacteria | Archaea | 1.65 | |
Archaea | Virus | 0.06 | ||||
Phylum | Cyanobacteria | Firmicutes | 15.36 | Proteobacteria | Firmicutes | 15.75 |
Firmicutes | Proteobacteria | 15.34 | Firmicutes | Proteobacteria | 14.62 | |
Proteobacteria | Firmicutes | 13.55 | Cyanobacteria | Proteobacteria | 9.51 | |
Cyanobacteria | Proteobacteria | 8.47 | Proteobacteria | Bacteroidetes | 5.26 | |
Firmicutes | Super Bacteroidetes/Chlorobi group | 3.91 | Proteobacteria | Cyanobacteria | 4.85 | |
Proteobacteria | Super Bacteroidetes/Chlorobi group | 3.56 | Firmicutes | Cyanobacteria | 4.76 | |
Proteobacteria | Cyanobacteria | 3.05 | Cyanobacteria | Firmicutes | 4.26 | |
Firmicutes | Cyanobacteria | 2.74 | Proteobacteria | Super Bacteroidetes/Chlorobi group | 3.14 | |
Firmicutes | Fusobacteria | 2.56 | Firmicutes | Super Bacteroidetes/Chlorobi group | 2.93 | |
Proteobacteria | Bacteroidetes | 2.16 | Proteobacteria | Actinobacteria | 2.27 | |
Class | Bacilli | Gammaproteobacteria | 10.75 | Alphaproteobacteria | Gammaproteobacteria | 6.43 |
Bacilli | Clostridia | 6.54 | Gammaproteobacteria | Bacilli | 5.59 | |
Gammaproteobacteria | Bacilli | 6.36 | Bacilli | Gammaproteobacteria | 5.46 | |
Bacilli | Eproteobacteria | 5.94 | Gammaproteobacteria | Betaproteobacteria | 4.97 | |
Gammaproteobacteria | Betaproteobacteria | 4.73 | Gammaproteobacteria | Alphaproteobacteria | 4.38 | |
Gammaproteobacteria | Clostridia | 4.33 | Gammaproteobacteria | Actinobacteria (class) | 4.37 | |
Negativicutes | Bacilli | 2.73 | Alphaproteobacteria | Betaproteobacteria | 4.2 | |
Bacilli | Flavobacteria | 2.65 | Bacilli | Eproteobacteria | 3.71 | |
Alphaproteobacteria | Clostridia | 2.5 | Gammaproteobacteria | Eproteobacteria | 2.56 | |
Bacilli | Fusobacteria (class) | 2.35 | Gammaproteobacteria | Clostridia | 2.51 |