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Table 1 Retrieval performances of 2577 queries for different methods on the Hinge Atlas dataset

From: A local average distance descriptor for flexible protein structure comparison

Method

Number of successful retrieval

Success rate (%)

LADED

2502

97.1

LADGD

2447

95.0

Matt-Flexible

2342

90.9

FlexSnap

2329

90.4

FASE

2282

88.6

jFATCAT

2241

87.0

FAST*

2234

86.7

Matt-Rigid*

2185

84.8

FlexProt

2167

84.1

  1. *Rigid alignment method.
  2. The results are ordered by the success rates and show that both LADED and LADGD outperform other methods.