Table 3 Comparison with non-alignment methods on Liu’s dataset
From: A local average distance descriptor for flexible protein structure comparison
Method | F1-measure (%) |
|---|---|
LADED | 43.27 |
LADGD | 43.18 |
Diffusion distance (DD) | 37.04 |
Inner distance (ID) | 35.83 |
Shape distribution (SD) | 28.40 |
Euclidean distance (ED) | 28.81 |
Solid angle histogram (SAH) | 25.69 |
Geodesic distance (GD) | 26.42 |
Spherical harmonic descriptor (SHD) | 23.93 |